Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Gm17807-201ENSMUST00000186869 298 ntBASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Gm9682-201ENSMUST00000197505 556 ntBASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd4Q8CC84 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Gm12644-201ENSMUST00000119935 606 ntBASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Gm9726-201ENSMUST00000180321 678 ntBASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd4Q8CC84 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Matn2-206ENSMUST00000228570 2798 ntBASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.11□□□□□ -0.31
Lysmd4Q8CC84 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 Gm5682-201ENSMUST00000173402 505 ntBASIC13.1□□□□□ -0.31
Lysmd4Q8CC84 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms