Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a6Q8C6K9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Gm37424-201ENSMUST00000191727 561 ntBASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a6Q8C6K9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Gm15823-201ENSMUST00000064305 670 ntBASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Celf4-206ENSMUST00000224553 1729 ntBASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Gm37230-201ENSMUST00000194491 818 ntBASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a6Q8C6K9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Gm27731-201ENSMUST00000185192 107 ntBASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a6Q8C6K9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms