Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp44Q8C2S0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Gm6736-201ENSMUST00000166583 948 ntBASIC17.11■□□□□ 0.33
Usp44Q8C2S0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp44Q8C2S0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.1■□□□□ 0.33
Usp44Q8C2S0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp44Q8C2S0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm22065-201ENSMUST00000103753 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm22066-201ENSMUST00000103761 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm24932-201ENSMUST00000103763 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm24115-201ENSMUST00000103799 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm22190-201ENSMUST00000103827 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm22191-201ENSMUST00000103831 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm24721-201ENSMUST00000103849 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm28018-201ENSMUST00000103869 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm26399-201ENSMUST00000103937 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm25349-201ENSMUST00000177728 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm23616-201ENSMUST00000177797 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm25871-201ENSMUST00000177816 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm24752-201ENSMUST00000178240 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm24496-201ENSMUST00000178287 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm25649-201ENSMUST00000178476 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm25548-201ENSMUST00000178681 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm23147-201ENSMUST00000178841 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm26095-201ENSMUST00000179270 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm22171-201ENSMUST00000179283 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm23936-201ENSMUST00000179354 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm22619-201ENSMUST00000179516 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm25255-201ENSMUST00000179579 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm24755-201ENSMUST00000179691 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm26506-201ENSMUST00000179692 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm25086-201ENSMUST00000179931 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm23243-201ENSMUST00000180047 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm24659-201ENSMUST00000180212 110 ntBASIC17.09■□□□□ 0.33
Usp44Q8C2S0 Gm24169-201ENSMUST00000180244 110 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms