Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Gm5479-201ENSMUST00000160578 435 ntBASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Gm6443-201ENSMUST00000203599 874 ntBASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Gm45098-201ENSMUST00000207179 657 ntBASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trub1Q8C0D0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trub1Q8C0D0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.08■□□□□ 0
Trub1Q8C0D0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trub1Q8C0D0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trub1Q8C0D0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.07■□□□□ 0
Trub1Q8C0D0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trub1Q8C0D0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.07■□□□□ 0
Trub1Q8C0D0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trub1Q8C0D0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.07■□□□□ 0
Trub1Q8C0D0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Gm17271-201ENSMUST00000165535 355 ntBASIC15.07■□□□□ 0
Trub1Q8C0D0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trub1Q8C0D0 Gm5264-201ENSMUST00000190584 848 ntBASIC15.07■□□□□ 0
Trub1Q8C0D0 Gm37230-201ENSMUST00000194491 818 ntBASIC15.07■□□□□ 0
Trub1Q8C0D0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.07■□□□□ 0
Trub1Q8C0D0 Gm9182-201ENSMUST00000217829 639 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms