Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Nup54Q8BTS4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Gm13616-201ENSMUST00000120600 222 ntBASIC14.97□□□□□ -0.01
Nup54Q8BTS4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nup54Q8BTS4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Nup54Q8BTS4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nup54Q8BTS4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nup54Q8BTS4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nup54Q8BTS4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nup54Q8BTS4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Gm15693-201ENSMUST00000120470 637 ntBASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup54Q8BTS4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms