Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.08■□□□□ 0
Suds3Q8BR65 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Suds3Q8BR65 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Suds3Q8BR65 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.07■□□□□ 0
Suds3Q8BR65 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.07■□□□□ 0
Suds3Q8BR65 Gm4995-201ENSMUST00000117247 432 ntBASIC15.07■□□□□ 0
Suds3Q8BR65 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.07■□□□□ 0
Suds3Q8BR65 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.07■□□□□ 0
Suds3Q8BR65 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Suds3Q8BR65 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.07■□□□□ 0
Suds3Q8BR65 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.07■□□□□ 0
Suds3Q8BR65 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Suds3Q8BR65 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.07■□□□□ 0
Suds3Q8BR65 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Suds3Q8BR65 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.07■□□□□ 0
Suds3Q8BR65 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Suds3Q8BR65 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.06■□□□□ 0
Suds3Q8BR65 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.06■□□□□ 0
Suds3Q8BR65 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.06■□□□□ 0
Suds3Q8BR65 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Suds3Q8BR65 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.06■□□□□ 0
Suds3Q8BR65 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Suds3Q8BR65 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.06■□□□□ 0
Suds3Q8BR65 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.06■□□□□ 0
Suds3Q8BR65 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Suds3Q8BR65 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.06■□□□□ 0
Suds3Q8BR65 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.06■□□□□ 0
Suds3Q8BR65 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.06■□□□□ 0
Suds3Q8BR65 Celf4-206ENSMUST00000224553 1729 ntBASIC15.06■□□□□ 0
Suds3Q8BR65 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Suds3Q8BR65 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Suds3Q8BR65 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Suds3Q8BR65 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Suds3Q8BR65 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Suds3Q8BR65 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Suds3Q8BR65 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Suds3Q8BR65 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Suds3Q8BR65 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.05■□□□□ -0
Suds3Q8BR65 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Suds3Q8BR65 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.05■□□□□ -0
Suds3Q8BR65 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Suds3Q8BR65 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.05■□□□□ -0
Suds3Q8BR65 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.05■□□□□ -0
Suds3Q8BR65 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.05■□□□□ -0
Suds3Q8BR65 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms