Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.57■□□□□ 0.08
Trim6Q8BGE7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim6Q8BGE7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Matn2-206ENSMUST00000228570 2798 ntBASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim6Q8BGE7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim6Q8BGE7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Gm11780-201ENSMUST00000136880 516 ntBASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim6Q8BGE7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim6Q8BGE7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trim6Q8BGE7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim6Q8BGE7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim6Q8BGE7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms