Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc116Q80X53 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Olfr286-202ENSMUST00000205305 969 ntBASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.34□□□□□ -0.11
Ccdc116Q80X53 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc116Q80X53 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc116Q80X53 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Ccdc116Q80X53 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc116Q80X53 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc116Q80X53 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc116Q80X53 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Gm27301-201ENSMUST00000184012 127 ntBASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc116Q80X53 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc116Q80X53 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc116Q80X53 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc116Q80X53 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc116Q80X53 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc116Q80X53 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc116Q80X53 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms