Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Gm13036-201ENSMUST00000117799 748 ntBASIC16.41■□□□□ 0.22
Abcf1Q6P542 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Gm43767-201ENSMUST00000198933 381 ntBASIC16.41■□□□□ 0.22
Abcf1Q6P542 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.41■□□□□ 0.22
Abcf1Q6P542 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.41■□□□□ 0.22
Abcf1Q6P542 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Abcf1Q6P542 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.4■□□□□ 0.22
Abcf1Q6P542 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.4■□□□□ 0.22
Abcf1Q6P542 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.4■□□□□ 0.22
Abcf1Q6P542 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Abcf1Q6P542 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Abcf1Q6P542 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Gm11764-201ENSMUST00000120221 623 ntBASIC16.39■□□□□ 0.21
Abcf1Q6P542 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Abcf1Q6P542 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.38■□□□□ 0.21
Abcf1Q6P542 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.38■□□□□ 0.21
Abcf1Q6P542 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Abcf1Q6P542 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms