Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhga7Q6DD96 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga7Q6DD96 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Mir8098-201ENSMUST00000184011 137 ntBASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Gm5864-201ENSMUST00000202263 970 ntBASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhga7Q6DD96 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms