Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VcanQ62059 Efs-202ENSMUST00000227037 2540 ntBASIC13.49□□□□□ -0.25
VcanQ62059 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Gm12585-201ENSMUST00000117307 290 ntBASIC13.49□□□□□ -0.25
VcanQ62059 Gm16177-201ENSMUST00000120728 718 ntBASIC13.49□□□□□ -0.25
VcanQ62059 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
VcanQ62059 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.49□□□□□ -0.25
VcanQ62059 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.49□□□□□ -0.25
VcanQ62059 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
VcanQ62059 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.49□□□□□ -0.25
VcanQ62059 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VcanQ62059 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
VcanQ62059 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.49□□□□□ -0.25
VcanQ62059 Cts7-204ENSMUST00000225321 1257 ntBASIC13.49□□□□□ -0.25
VcanQ62059 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
VcanQ62059 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
VcanQ62059 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VcanQ62059 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.49□□□□□ -0.25
VcanQ62059 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
VcanQ62059 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
VcanQ62059 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.48□□□□□ -0.25
VcanQ62059 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.48□□□□□ -0.25
VcanQ62059 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.48□□□□□ -0.25
VcanQ62059 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VcanQ62059 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VcanQ62059 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.48□□□□□ -0.25
VcanQ62059 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.48□□□□□ -0.25
VcanQ62059 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.48□□□□□ -0.25
VcanQ62059 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.48□□□□□ -0.25
VcanQ62059 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.48□□□□□ -0.25
VcanQ62059 Gm8598-201ENSMUST00000221184 836 ntBASIC13.48□□□□□ -0.25
VcanQ62059 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VcanQ62059 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.47□□□□□ -0.25
VcanQ62059 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VcanQ62059 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.47□□□□□ -0.25
VcanQ62059 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VcanQ62059 Gm8566-201ENSMUST00000120174 465 ntBASIC13.47□□□□□ -0.25
VcanQ62059 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VcanQ62059 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.47□□□□□ -0.25
VcanQ62059 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VcanQ62059 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Gm29396-201ENSMUST00000185659 716 ntBASIC13.47□□□□□ -0.25
VcanQ62059 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.47□□□□□ -0.25
VcanQ62059 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VcanQ62059 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VcanQ62059 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.46□□□□□ -0.25
VcanQ62059 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VcanQ62059 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VcanQ62059 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
VcanQ62059 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.46□□□□□ -0.25
VcanQ62059 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms