Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.29□□□□□ -0.6
Notch3Q61982 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Notch3Q61982 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.29□□□□□ -0.6
Notch3Q61982 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.28□□□□□ -0.6
Notch3Q61982 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Notch3Q61982 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Notch3Q61982 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Notch3Q61982 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.28□□□□□ -0.6
Notch3Q61982 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Notch3Q61982 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Notch3Q61982 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Notch3Q61982 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.28□□□□□ -0.6
Notch3Q61982 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Notch3Q61982 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Notch3Q61982 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch3Q61982 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.28□□□□□ -0.6
Notch3Q61982 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Notch3Q61982 Gm13015-201ENSMUST00000118674 204 ntBASIC11.27□□□□□ -0.6
Notch3Q61982 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Notch3Q61982 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Notch3Q61982 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Notch3Q61982 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Notch3Q61982 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Notch3Q61982 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Notch3Q61982 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.27□□□□□ -0.61
Notch3Q61982 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.27□□□□□ -0.61
Notch3Q61982 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.27□□□□□ -0.61
Notch3Q61982 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.27□□□□□ -0.61
Notch3Q61982 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Notch3Q61982 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.27□□□□□ -0.61
Notch3Q61982 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Notch3Q61982 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Notch3Q61982 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.27□□□□□ -0.61
Notch3Q61982 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Notch3Q61982 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.27□□□□□ -0.61
Notch3Q61982 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Notch3Q61982 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Notch3Q61982 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Notch3Q61982 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Notch3Q61982 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch3Q61982 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.27□□□□□ -0.61
Notch3Q61982 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.26□□□□□ -0.61
Notch3Q61982 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.26□□□□□ -0.61
Notch3Q61982 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Notch3Q61982 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.26□□□□□ -0.61
Notch3Q61982 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Notch3Q61982 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.26□□□□□ -0.61
Notch3Q61982 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.26□□□□□ -0.61
Notch3Q61982 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.26□□□□□ -0.61
Notch3Q61982 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.26□□□□□ -0.61
Notch3Q61982 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch3Q61982 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Notch3Q61982 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms