Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Foxc1Q61572 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Foxc1Q61572 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Gm12467-201ENSMUST00000117625 745 ntBASIC10.84□□□□□ -0.67
Foxc1Q61572 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Gm10499-201ENSMUST00000174094 934 ntBASIC10.84□□□□□ -0.67
Foxc1Q61572 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC10.84□□□□□ -0.67
Foxc1Q61572 Gm27300-201ENSMUST00000184085 97 ntBASIC10.84□□□□□ -0.67
Foxc1Q61572 Gm27335-201ENSMUST00000184758 97 ntBASIC10.84□□□□□ -0.67
Foxc1Q61572 Gm10576-201ENSMUST00000191927 825 ntBASIC10.84□□□□□ -0.67
Foxc1Q61572 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.84□□□□□ -0.67
Foxc1Q61572 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.84□□□□□ -0.67
Foxc1Q61572 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.84□□□□□ -0.67
Foxc1Q61572 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.84□□□□□ -0.67
Foxc1Q61572 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Foxc1Q61572 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Foxc1Q61572 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.83□□□□□ -0.68
Foxc1Q61572 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC10.83□□□□□ -0.68
Foxc1Q61572 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.83□□□□□ -0.68
Foxc1Q61572 Gm43974-201ENSMUST00000205080 684 ntBASIC10.83□□□□□ -0.68
Foxc1Q61572 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Foxc1Q61572 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Foxc1Q61572 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.83□□□□□ -0.68
Foxc1Q61572 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Foxc1Q61572 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Foxc1Q61572 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Foxc1Q61572 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Foxc1Q61572 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.82□□□□□ -0.68
Foxc1Q61572 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Foxc1Q61572 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms