Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox17Q61473 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.75□□□□□ -0.21
Sox17Q61473 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.75□□□□□ -0.21
Sox17Q61473 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sox17Q61473 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sox17Q61473 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.75□□□□□ -0.21
Sox17Q61473 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox17Q61473 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox17Q61473 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox17Q61473 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sox17Q61473 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.74□□□□□ -0.21
Sox17Q61473 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sox17Q61473 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.74□□□□□ -0.21
Sox17Q61473 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox17Q61473 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Gm23634-201ENSMUST00000175071 91 ntBASIC13.74□□□□□ -0.21
Sox17Q61473 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox17Q61473 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.74□□□□□ -0.21
Sox17Q61473 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox17Q61473 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox17Q61473 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox17Q61473 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.73□□□□□ -0.21
Sox17Q61473 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Sox17Q61473 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox17Q61473 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.73□□□□□ -0.21
Sox17Q61473 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.73□□□□□ -0.21
Sox17Q61473 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox17Q61473 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.73□□□□□ -0.21
Sox17Q61473 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Sox17Q61473 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Sox17Q61473 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox17Q61473 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox17Q61473 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox17Q61473 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms