Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Irf9Q61179 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Irf9Q61179 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.17■□□□□ 0.5
Irf9Q61179 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Irf9Q61179 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Gm27437-201ENSMUST00000183429 107 ntBASIC18.17■□□□□ 0.5
Irf9Q61179 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.17■□□□□ 0.5
Irf9Q61179 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Irf9Q61179 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Irf9Q61179 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Irf9Q61179 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Irf9Q61179 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Irf9Q61179 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Irf9Q61179 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.16■□□□□ 0.5
Irf9Q61179 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Irf9Q61179 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Irf9Q61179 Gm15653-201ENSMUST00000119247 907 ntBASIC18.16■□□□□ 0.5
Irf9Q61179 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.16■□□□□ 0.5
Irf9Q61179 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.16■□□□□ 0.5
Irf9Q61179 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.16■□□□□ 0.5
Irf9Q61179 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.16■□□□□ 0.5
Irf9Q61179 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.16■□□□□ 0.5
Irf9Q61179 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.16■□□□□ 0.5
Irf9Q61179 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Irf9Q61179 Gm46209-201ENSMUST00000217912 553 ntBASIC18.16■□□□□ 0.5
Irf9Q61179 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Irf9Q61179 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Irf9Q61179 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.16■□□□□ 0.5
Irf9Q61179 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Irf9Q61179 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Irf9Q61179 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Irf9Q61179 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Irf9Q61179 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Irf9Q61179 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.15■□□□□ 0.5
Irf9Q61179 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.15■□□□□ 0.5
Irf9Q61179 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Carlr-201ENSMUST00000181515 2574 ntBASIC18.15■□□□□ 0.5
Irf9Q61179 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.15■□□□□ 0.5
Irf9Q61179 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.15■□□□□ 0.5
Irf9Q61179 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.15■□□□□ 0.5
Irf9Q61179 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.15■□□□□ 0.5
Irf9Q61179 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Irf9Q61179 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Irf9Q61179 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Irf9Q61179 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Irf9Q61179 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.14■□□□□ 0.49
Irf9Q61179 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf9Q61179 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Irf9Q61179 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf9Q61179 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.14■□□□□ 0.49
Irf9Q61179 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Irf9Q61179 Gm14719-201ENSMUST00000121891 340 ntBASIC18.14■□□□□ 0.49
Irf9Q61179 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.14■□□□□ 0.49
Irf9Q61179 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.14■□□□□ 0.49
Irf9Q61179 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Irf9Q61179 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Irf9Q61179 Gm43703-201ENSMUST00000200523 763 ntBASIC18.14■□□□□ 0.49
Irf9Q61179 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.14■□□□□ 0.49
Irf9Q61179 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Irf9Q61179 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.14■□□□□ 0.49
Irf9Q61179 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf9Q61179 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf9Q61179 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Irf9Q61179 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.14■□□□□ 0.49
Irf9Q61179 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf9Q61179 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms