Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Gm9182-201ENSMUST00000217829 639 ntBASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-4Q5R1I0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Gm13015-201ENSMUST00000118674 204 ntBASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-4Q5R1I0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Gm6415-201ENSMUST00000118488 348 ntBASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 AA543401-201ENSMUST00000164248 1269 ntBASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Olfr286-202ENSMUST00000205305 969 ntBASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Efs-202ENSMUST00000227037 2540 ntBASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-4Q5R1I0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-4Q5R1I0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms