Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Gm26039-201ENSMUST00000158152 144 ntBASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Gm27389-201ENSMUST00000183622 195 ntBASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-3Q5R1C3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Paupar-201ENSMUST00000194826 3482 ntBASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Mir5130-201ENSMUST00000175160 84 ntBASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Gm45058-201ENSMUST00000205810 766 ntBASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-3Q5R1C3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Gm37055-201ENSMUST00000191866 133 ntBASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms