Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm12428-201ENSMUST00000119844 727 ntBASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Gm6222-201ENSMUST00000120787 396 ntBASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Gm27631-201ENSMUST00000184163 466 ntBASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Gm7775-201ENSMUST00000218871 853 ntBASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf38aQ4FK66 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Mir6977-201ENSMUST00000184960 64 ntBASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Gm16476-201ENSMUST00000221544 139 ntBASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prpf38aQ4FK66 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Mir1897-201ENSMUST00000122581 272 ntBASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prpf38aQ4FK66 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prpf38aQ4FK66 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms