Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa3Q3UPR0 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.64□□□□□ -0.39
Shisa3Q3UPR0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa3Q3UPR0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Shisa3Q3UPR0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa3Q3UPR0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa3Q3UPR0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa3Q3UPR0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.64□□□□□ -0.39
Shisa3Q3UPR0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa3Q3UPR0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Gm6754-201ENSMUST00000117124 913 ntBASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Gm8344-201ENSMUST00000119813 856 ntBASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa3Q3UPR0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Gm4535-201ENSMUST00000182274 558 ntBASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Mzt1-203ENSMUST00000227948 952 ntBASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Gm10355-201ENSMUST00000097146 517 ntBASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Shisa3Q3UPR0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa3Q3UPR0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa3Q3UPR0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms