Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Q3U1D9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Q3U1D9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.7□□□□□ -0.38
Q3U1D9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.7□□□□□ -0.38
Q3U1D9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Gm13823-201ENSMUST00000119930 345 ntBASIC12.7□□□□□ -0.38
Q3U1D9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Gm9719-201ENSMUST00000162765 543 ntBASIC12.7□□□□□ -0.38
Q3U1D9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Q3U1D9 Mir8102-201ENSMUST00000184148 139 ntBASIC12.7□□□□□ -0.38
Q3U1D9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.7□□□□□ -0.38
Q3U1D9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.7□□□□□ -0.38
Q3U1D9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.7□□□□□ -0.38
Q3U1D9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.7□□□□□ -0.38
Q3U1D9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.7□□□□□ -0.38
Q3U1D9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Q3U1D9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Q3U1D9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Q3U1D9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Q3U1D9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.69□□□□□ -0.38
Q3U1D9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.69□□□□□ -0.38
Q3U1D9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.69□□□□□ -0.38
Q3U1D9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.69□□□□□ -0.38
Q3U1D9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Q3U1D9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.69□□□□□ -0.38
Q3U1D9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.69□□□□□ -0.38
Q3U1D9 Mir6977-201ENSMUST00000184960 64 ntBASIC12.69□□□□□ -0.38
Q3U1D9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.69□□□□□ -0.38
Q3U1D9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.69□□□□□ -0.38
Q3U1D9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.69□□□□□ -0.38
Q3U1D9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Q3U1D9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Q3U1D9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Q3U1D9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.68□□□□□ -0.38
Q3U1D9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Q3U1D9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.68□□□□□ -0.38
Q3U1D9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Q3U1D9 Gm24543-201ENSMUST00000103867 82 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms