Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Carlr-201ENSMUST00000181515 2574 ntBASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Gm10052-201ENSMUST00000168019 960 ntBASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Gm7729-201ENSMUST00000050143 801 ntBASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hddc2Q3SXD3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Gm13436-201ENSMUST00000120418 567 ntBASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Gm27389-201ENSMUST00000183622 195 ntBASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Gm37055-201ENSMUST00000191866 133 ntBASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Gm44430-201ENSMUST00000203376 995 ntBASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Gm45058-201ENSMUST00000205810 766 ntBASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hddc2Q3SXD3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hddc2Q3SXD3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms