Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm17391-201ENSMUST00000171036 126 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm17889-201ENSMUST00000198410 598 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm7902-201ENSMUST00000198842 947 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm17330-201ENSMUST00000221047 165 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm9211-201ENSMUST00000182882 975 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 AC159376.1-201ENSMUST00000218504 630 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 AC121598.1-201ENSMUST00000228224 1019 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Gm12969-201ENSMUST00000120199 1004 ntBASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Gm44552-201ENSMUST00000205458 1247 ntBASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Gm45412-201ENSMUST00000210217 2275 ntBASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Gm15276-201ENSMUST00000145953 498 ntBASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 AC163637.1-201ENSMUST00000215491 1894 ntBASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ush2AQ2QI47 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Ush2AQ2QI47 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ush2AQ2QI47 Gm16379-201ENSMUST00000161469 348 ntBASIC7.59□□□□□ -1.2
Ush2AQ2QI47 Gm8762-201ENSMUST00000193486 339 ntBASIC7.59□□□□□ -1.2
Ush2AQ2QI47 Mt1-202ENSMUST00000211807 1085 ntBASIC7.59□□□□□ -1.2
Ush2AQ2QI47 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
Ush2AQ2QI47 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ush2AQ2QI47 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ush2AQ2QI47 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm25604-201ENSMUST00000158359 133 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 AC166997.1-201ENSMUST00000225122 572 ntBASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ush2AQ2QI47 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms