Protein–RNA interactions for Protein: Q2NKI2

Vax1, Ventral anterior homeobox 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vax1Q2NKI2 Shd-206ENSMUST00000225145 998 ntBASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vax1Q2NKI2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Gm15823-201ENSMUST00000064305 670 ntBASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vax1Q2NKI2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Gm4875-201ENSMUST00000118257 786 ntBASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Gm45668-201ENSMUST00000211271 493 ntBASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vax1Q2NKI2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vax1Q2NKI2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vax1Q2NKI2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.33□□□□□ -0.27
Vax1Q2NKI2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vax1Q2NKI2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Gm11918-201ENSMUST00000121660 179 ntBASIC13.33□□□□□ -0.28
Vax1Q2NKI2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms