Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.98□□□□□ -0.33
Chd8Q09XV5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Chd8Q09XV5 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.98□□□□□ -0.33
Chd8Q09XV5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chd8Q09XV5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd8Q09XV5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Gm14277-201ENSMUST00000121195 360 ntBASIC12.97□□□□□ -0.33
Chd8Q09XV5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.97□□□□□ -0.33
Chd8Q09XV5 Gm20392-201ENSMUST00000173047 701 ntBASIC12.97□□□□□ -0.33
Chd8Q09XV5 Gm26927-201ENSMUST00000182385 965 ntBASIC12.97□□□□□ -0.33
Chd8Q09XV5 Mir6958-201ENSMUST00000184207 73 ntBASIC12.97□□□□□ -0.33
Chd8Q09XV5 Gm29155-201ENSMUST00000185910 269 ntBASIC12.97□□□□□ -0.33
Chd8Q09XV5 Gm42779-201ENSMUST00000198807 406 ntBASIC12.97□□□□□ -0.33
Chd8Q09XV5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.97□□□□□ -0.33
Chd8Q09XV5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.97□□□□□ -0.33
Chd8Q09XV5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd8Q09XV5 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Gm45770-201ENSMUST00000212105 616 ntBASIC12.96□□□□□ -0.33
Chd8Q09XV5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd8Q09XV5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Chd8Q09XV5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Chd8Q09XV5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Chd8Q09XV5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.96□□□□□ -0.34
Chd8Q09XV5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Chd8Q09XV5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Chd8Q09XV5 BC001981-202ENSMUST00000191393 1545 ntBASIC12.96□□□□□ -0.34
Chd8Q09XV5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Chd8Q09XV5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chd8Q09XV5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chd8Q09XV5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.95□□□□□ -0.34
Chd8Q09XV5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Gm15370-201ENSMUST00000117158 253 ntBASIC12.95□□□□□ -0.34
Chd8Q09XV5 Gm11524-201ENSMUST00000119349 807 ntBASIC12.95□□□□□ -0.34
Chd8Q09XV5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Gm2991-201ENSMUST00000173338 480 ntBASIC12.95□□□□□ -0.34
Chd8Q09XV5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chd8Q09XV5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms