Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col6a2Q02788 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col6a2Q02788 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Col6a2Q02788 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.62□□□□□ -0.07
Col6a2Q02788 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.62□□□□□ -0.07
Col6a2Q02788 Gm2451-201ENSMUST00000199447 999 ntBASIC14.62□□□□□ -0.07
Col6a2Q02788 Gm10290-201ENSMUST00000200451 999 ntBASIC14.62□□□□□ -0.07
Col6a2Q02788 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Gm45098-201ENSMUST00000207179 657 ntBASIC14.62□□□□□ -0.07
Col6a2Q02788 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.62□□□□□ -0.07
Col6a2Q02788 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.62□□□□□ -0.07
Col6a2Q02788 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.62□□□□□ -0.07
Col6a2Q02788 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col6a2Q02788 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col6a2Q02788 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Col6a2Q02788 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Col6a2Q02788 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Col6a2Q02788 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.61□□□□□ -0.07
Col6a2Q02788 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col6a2Q02788 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Col6a2Q02788 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Col6a2Q02788 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col6a2Q02788 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Col6a2Q02788 Gm9726-201ENSMUST00000180321 678 ntBASIC14.6□□□□□ -0.07
Col6a2Q02788 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Gm29541-201ENSMUST00000191351 678 ntBASIC14.6□□□□□ -0.07
Col6a2Q02788 Gm38294-201ENSMUST00000192831 381 ntBASIC14.6□□□□□ -0.07
Col6a2Q02788 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.6□□□□□ -0.07
Col6a2Q02788 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col6a2Q02788 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col6a2Q02788 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.59□□□□□ -0.07
Col6a2Q02788 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Col6a2Q02788 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.59□□□□□ -0.07
Col6a2Q02788 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col6a2Q02788 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.59□□□□□ -0.07
Col6a2Q02788 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.59□□□□□ -0.07
Col6a2Q02788 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.59□□□□□ -0.07
Col6a2Q02788 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.59□□□□□ -0.07
Col6a2Q02788 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Gm20949-201ENSMUST00000206478 952 ntBASIC14.59□□□□□ -0.07
Col6a2Q02788 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col6a2Q02788 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms