Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.85□□□□□ -0.19
Nkx3-2P97503 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Gm10253-201ENSMUST00000194270 940 ntBASIC13.85□□□□□ -0.19
Nkx3-2P97503 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Gm43767-201ENSMUST00000198933 381 ntBASIC13.85□□□□□ -0.19
Nkx3-2P97503 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.85□□□□□ -0.19
Nkx3-2P97503 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx3-2P97503 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.84□□□□□ -0.19
Nkx3-2P97503 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.84□□□□□ -0.19
Nkx3-2P97503 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.84□□□□□ -0.19
Nkx3-2P97503 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.84□□□□□ -0.19
Nkx3-2P97503 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx3-2P97503 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx3-2P97503 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.83□□□□□ -0.19
Nkx3-2P97503 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx3-2P97503 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx3-2P97503 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx3-2P97503 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.83□□□□□ -0.19
Nkx3-2P97503 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Gm10576-201ENSMUST00000191927 825 ntBASIC13.83□□□□□ -0.2
Nkx3-2P97503 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.83□□□□□ -0.2
Nkx3-2P97503 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Nkx3-2P97503 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.83□□□□□ -0.2
Nkx3-2P97503 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx3-2P97503 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms