Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.31□□□□□ -0.44
Npas1P97459 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Npas1P97459 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Npas1P97459 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.3□□□□□ -0.44
Npas1P97459 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Npas1P97459 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Gm13312-201ENSMUST00000119631 718 ntBASIC12.3□□□□□ -0.44
Npas1P97459 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.3□□□□□ -0.44
Npas1P97459 Gm17808-201ENSMUST00000200859 894 ntBASIC12.3□□□□□ -0.44
Npas1P97459 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.3□□□□□ -0.44
Npas1P97459 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.3□□□□□ -0.44
Npas1P97459 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.3□□□□□ -0.44
Npas1P97459 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Npas1P97459 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Npas1P97459 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Npas1P97459 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Npas1P97459 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.29□□□□□ -0.44
Npas1P97459 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Npas1P97459 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.29□□□□□ -0.44
Npas1P97459 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.29□□□□□ -0.44
Npas1P97459 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.29□□□□□ -0.44
Npas1P97459 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Npas1P97459 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Npas1P97459 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.29□□□□□ -0.44
Npas1P97459 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Npas1P97459 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Npas1P97459 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.29□□□□□ -0.44
Npas1P97459 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Npas1P97459 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Npas1P97459 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Npas1P97459 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.29□□□□□ -0.44
Npas1P97459 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Npas1P97459 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Npas1P97459 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms