Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Mir6990-201ENSMUST00000183724 91 ntBASIC13.05□□□□□ -0.32
SgcbP82349 Gm43125-201ENSMUST00000201724 730 ntBASIC13.05□□□□□ -0.32
SgcbP82349 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.05□□□□□ -0.32
SgcbP82349 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.05□□□□□ -0.32
SgcbP82349 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.05□□□□□ -0.32
SgcbP82349 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.05□□□□□ -0.32
SgcbP82349 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
SgcbP82349 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SgcbP82349 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SgcbP82349 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.05□□□□□ -0.32
SgcbP82349 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.05□□□□□ -0.32
SgcbP82349 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
SgcbP82349 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.04□□□□□ -0.32
SgcbP82349 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SgcbP82349 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.04□□□□□ -0.32
SgcbP82349 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.04□□□□□ -0.32
SgcbP82349 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SgcbP82349 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SgcbP82349 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SgcbP82349 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.04□□□□□ -0.32
SgcbP82349 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.04□□□□□ -0.32
SgcbP82349 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SgcbP82349 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.04□□□□□ -0.32
SgcbP82349 Gm27920-201ENSMUST00000183953 96 ntBASIC13.04□□□□□ -0.32
SgcbP82349 Gm38225-201ENSMUST00000194001 393 ntBASIC13.04□□□□□ -0.32
SgcbP82349 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
SgcbP82349 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.04□□□□□ -0.32
SgcbP82349 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SgcbP82349 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SgcbP82349 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SgcbP82349 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcbP82349 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.03□□□□□ -0.32
SgcbP82349 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.03□□□□□ -0.32
SgcbP82349 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.03□□□□□ -0.32
SgcbP82349 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
SgcbP82349 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SgcbP82349 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SgcbP82349 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcbP82349 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms