Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PrkcbP68404 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PrkcbP68404 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PrkcbP68404 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.81■□□□□ 0.12
PrkcbP68404 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.81■□□□□ 0.12
PrkcbP68404 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Gm27618-201ENSMUST00000183671 60 ntBASIC15.81■□□□□ 0.12
PrkcbP68404 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.81■□□□□ 0.12
PrkcbP68404 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PrkcbP68404 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PrkcbP68404 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.81■□□□□ 0.12
PrkcbP68404 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.81■□□□□ 0.12
PrkcbP68404 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PrkcbP68404 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.8■□□□□ 0.12
PrkcbP68404 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.8■□□□□ 0.12
PrkcbP68404 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PrkcbP68404 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PrkcbP68404 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.8■□□□□ 0.12
PrkcbP68404 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.8■□□□□ 0.12
PrkcbP68404 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
PrkcbP68404 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PrkcbP68404 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.79■□□□□ 0.12
PrkcbP68404 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
PrkcbP68404 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PrkcbP68404 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PrkcbP68404 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.79■□□□□ 0.12
PrkcbP68404 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PrkcbP68404 Gm27622-201ENSMUST00000183779 60 ntBASIC15.79■□□□□ 0.12
PrkcbP68404 Gm28630-201ENSMUST00000187806 498 ntBASIC15.79■□□□□ 0.12
PrkcbP68404 Gm38294-201ENSMUST00000192831 381 ntBASIC15.79■□□□□ 0.12
PrkcbP68404 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.79■□□□□ 0.12
PrkcbP68404 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PrkcbP68404 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.79■□□□□ 0.12
PrkcbP68404 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.79■□□□□ 0.12
PrkcbP68404 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PrkcbP68404 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PrkcbP68404 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.78■□□□□ 0.12
PrkcbP68404 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PrkcbP68404 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PrkcbP68404 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms