Protein–RNA interactions for Protein: P63072

Ubd, Ubiquitin D, mousemouse

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbdP63072 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
UbdP63072 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UbdP63072 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UbdP63072 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
UbdP63072 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UbdP63072 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.69□□□□□ -0.38
UbdP63072 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UbdP63072 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
UbdP63072 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UbdP63072 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UbdP63072 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.69□□□□□ -0.38
UbdP63072 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbdP63072 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
UbdP63072 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
UbdP63072 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UbdP63072 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.68□□□□□ -0.38
UbdP63072 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UbdP63072 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.68□□□□□ -0.38
UbdP63072 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Gm7862-201ENSMUST00000121461 292 ntBASIC12.68□□□□□ -0.38
UbdP63072 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.68□□□□□ -0.38
UbdP63072 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.68□□□□□ -0.38
UbdP63072 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
UbdP63072 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.68□□□□□ -0.38
UbdP63072 Gm45167-201ENSMUST00000208007 322 ntBASIC12.68□□□□□ -0.38
UbdP63072 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.68□□□□□ -0.38
UbdP63072 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Gm18246-201ENSMUST00000221023 728 ntBASIC12.68□□□□□ -0.38
UbdP63072 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.68□□□□□ -0.38
UbdP63072 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UbdP63072 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
UbdP63072 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
UbdP63072 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbdP63072 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.67□□□□□ -0.38
UbdP63072 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UbdP63072 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
UbdP63072 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.67□□□□□ -0.38
UbdP63072 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
UbdP63072 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.67□□□□□ -0.38
UbdP63072 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UbdP63072 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.67□□□□□ -0.38
UbdP63072 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbdP63072 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms