Protein–RNA interactions for Protein: P62878

Rbx1, E3 ubiquitin-protein ligase RBX1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbx1P62878 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rbx1P62878 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Rbx1P62878 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rbx1P62878 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rbx1P62878 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Rbx1P62878 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rbx1P62878 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rbx1P62878 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rbx1P62878 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rbx1P62878 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.84□□□□□ -0.67
Rbx1P62878 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.84□□□□□ -0.67
Rbx1P62878 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rbx1P62878 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.84□□□□□ -0.67
Rbx1P62878 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rbx1P62878 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rbx1P62878 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Rbx1P62878 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rbx1P62878 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rbx1P62878 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.83□□□□□ -0.68
Rbx1P62878 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Rbx1P62878 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rbx1P62878 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.83□□□□□ -0.68
Rbx1P62878 Gm6257-201ENSMUST00000163864 910 ntBASIC10.83□□□□□ -0.68
Rbx1P62878 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.83□□□□□ -0.68
Rbx1P62878 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Rbx1P62878 Mir7071-201ENSMUST00000184847 69 ntBASIC10.83□□□□□ -0.68
Rbx1P62878 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.83□□□□□ -0.68
Rbx1P62878 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rbx1P62878 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.83□□□□□ -0.68
Rbx1P62878 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rbx1P62878 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rbx1P62878 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rbx1P62878 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.82□□□□□ -0.68
Rbx1P62878 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.82□□□□□ -0.68
Rbx1P62878 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rbx1P62878 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 AA414768-201ENSMUST00000121924 1257 ntBASIC10.82□□□□□ -0.68
Rbx1P62878 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Rbx1P62878 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.82□□□□□ -0.68
Rbx1P62878 Gm6728-201ENSMUST00000178117 1065 ntBASIC10.82□□□□□ -0.68
Rbx1P62878 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.82□□□□□ -0.68
Rbx1P62878 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Rbx1P62878 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.82□□□□□ -0.68
Rbx1P62878 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rbx1P62878 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.82□□□□□ -0.68
Rbx1P62878 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rbx1P62878 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.81□□□□□ -0.68
Rbx1P62878 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Rbx1P62878 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rbx1P62878 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rbx1P62878 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rbx1P62878 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rbx1P62878 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rbx1P62878 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rbx1P62878 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rbx1P62878 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rbx1P62878 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.81□□□□□ -0.68
Rbx1P62878 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms