Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Lsm6P62313 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.84□□□□□ -0.35
Lsm6P62313 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lsm6P62313 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.84□□□□□ -0.35
Lsm6P62313 Gm17968-201ENSMUST00000194902 784 ntBASIC12.84□□□□□ -0.35
Lsm6P62313 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.84□□□□□ -0.35
Lsm6P62313 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lsm6P62313 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.84□□□□□ -0.35
Lsm6P62313 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm6P62313 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm6P62313 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm6P62313 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm6P62313 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm6P62313 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.83□□□□□ -0.35
Lsm6P62313 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.83□□□□□ -0.36
Lsm6P62313 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Lsm6P62313 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.83□□□□□ -0.36
Lsm6P62313 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Gm9182-201ENSMUST00000217829 639 ntBASIC12.83□□□□□ -0.36
Lsm6P62313 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lsm6P62313 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lsm6P62313 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm6P62313 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm6P62313 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm6P62313 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.82□□□□□ -0.36
Lsm6P62313 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.82□□□□□ -0.36
Lsm6P62313 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.82□□□□□ -0.36
Lsm6P62313 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm6P62313 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Gm9385-201ENSMUST00000117563 472 ntBASIC12.82□□□□□ -0.36
Lsm6P62313 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm6P62313 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm6P62313 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.82□□□□□ -0.36
Lsm6P62313 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm6P62313 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lsm6P62313 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Lsm6P62313 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm6P62313 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lsm6P62313 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms