Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.29□□□□□ -0.28
Vbp1P61759 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vbp1P61759 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.29□□□□□ -0.28
Vbp1P61759 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.29□□□□□ -0.28
Vbp1P61759 Gm19164-201ENSMUST00000210667 640 ntBASIC13.29□□□□□ -0.28
Vbp1P61759 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.29□□□□□ -0.28
Vbp1P61759 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.29□□□□□ -0.28
Vbp1P61759 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.29□□□□□ -0.28
Vbp1P61759 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.29□□□□□ -0.28
Vbp1P61759 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.29□□□□□ -0.28
Vbp1P61759 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.29□□□□□ -0.28
Vbp1P61759 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vbp1P61759 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Vbp1P61759 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Vbp1P61759 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vbp1P61759 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vbp1P61759 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vbp1P61759 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.28□□□□□ -0.28
Vbp1P61759 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vbp1P61759 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vbp1P61759 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.28□□□□□ -0.28
Vbp1P61759 Gm18101-201ENSMUST00000215769 548 ntBASIC13.28□□□□□ -0.28
Vbp1P61759 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.28□□□□□ -0.28
Vbp1P61759 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.28□□□□□ -0.28
Vbp1P61759 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Vbp1P61759 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.28□□□□□ -0.28
Vbp1P61759 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Vbp1P61759 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vbp1P61759 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.28□□□□□ -0.28
Vbp1P61759 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vbp1P61759 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vbp1P61759 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Vbp1P61759 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Vbp1P61759 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.27□□□□□ -0.28
Vbp1P61759 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vbp1P61759 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Vbp1P61759 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vbp1P61759 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.27□□□□□ -0.29
Vbp1P61759 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.27□□□□□ -0.29
Vbp1P61759 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.27□□□□□ -0.29
Vbp1P61759 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vbp1P61759 Mir5122-201ENSMUST00000175004 89 ntBASIC13.27□□□□□ -0.29
Vbp1P61759 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.27□□□□□ -0.29
Vbp1P61759 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vbp1P61759 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vbp1P61759 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vbp1P61759 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms