Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1bP61025 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1bP61025 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1bP61025 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1bP61025 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1bP61025 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.48□□□□□ -0.73
Cks1bP61025 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cks1bP61025 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.48□□□□□ -0.73
Cks1bP61025 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cks1bP61025 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.48□□□□□ -0.73
Cks1bP61025 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Gm11355-201ENSMUST00000121120 306 ntBASIC10.48□□□□□ -0.73
Cks1bP61025 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.48□□□□□ -0.73
Cks1bP61025 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Gm45058-201ENSMUST00000205810 766 ntBASIC10.48□□□□□ -0.73
Cks1bP61025 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cks1bP61025 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cks1bP61025 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cks1bP61025 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cks1bP61025 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cks1bP61025 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1bP61025 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Cks1bP61025 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.47□□□□□ -0.73
Cks1bP61025 Gm37722-201ENSMUST00000193757 208 ntBASIC10.47□□□□□ -0.73
Cks1bP61025 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cks1bP61025 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.47□□□□□ -0.73
Cks1bP61025 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cks1bP61025 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Cks1bP61025 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.47□□□□□ -0.73
Cks1bP61025 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Cks1bP61025 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Cks1bP61025 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1bP61025 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cks1bP61025 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.46□□□□□ -0.73
Cks1bP61025 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Cks1bP61025 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cks1bP61025 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1bP61025 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms