Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sssca1P56873 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Sssca1P56873 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sssca1P56873 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sssca1P56873 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.85□□□□□ -0.51
Sssca1P56873 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sssca1P56873 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sssca1P56873 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.84□□□□□ -0.51
Sssca1P56873 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.84□□□□□ -0.51
Sssca1P56873 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.84□□□□□ -0.51
Sssca1P56873 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Gm13836-201ENSMUST00000121159 501 ntBASIC11.84□□□□□ -0.51
Sssca1P56873 Gm33142-201ENSMUST00000193913 867 ntBASIC11.84□□□□□ -0.51
Sssca1P56873 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.84□□□□□ -0.51
Sssca1P56873 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sssca1P56873 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.84□□□□□ -0.51
Sssca1P56873 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sssca1P56873 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sssca1P56873 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.83□□□□□ -0.52
Sssca1P56873 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.83□□□□□ -0.52
Sssca1P56873 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sssca1P56873 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sssca1P56873 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Sssca1P56873 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Sssca1P56873 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Gm14859-201ENSMUST00000117752 357 ntBASIC11.83□□□□□ -0.52
Sssca1P56873 Gm11780-201ENSMUST00000136880 516 ntBASIC11.83□□□□□ -0.52
Sssca1P56873 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.83□□□□□ -0.52
Sssca1P56873 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Sssca1P56873 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.83□□□□□ -0.52
Sssca1P56873 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.83□□□□□ -0.52
Sssca1P56873 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.83□□□□□ -0.52
Sssca1P56873 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sssca1P56873 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.83□□□□□ -0.52
Sssca1P56873 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.82□□□□□ -0.52
Sssca1P56873 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sssca1P56873 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Sssca1P56873 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms