Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.4□□□□□ -0.1
CtskP55097 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.4□□□□□ -0.1
CtskP55097 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.4□□□□□ -0.1
CtskP55097 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.4□□□□□ -0.1
CtskP55097 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.4□□□□□ -0.1
CtskP55097 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CtskP55097 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CtskP55097 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CtskP55097 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CtskP55097 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtskP55097 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CtskP55097 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.39□□□□□ -0.11
CtskP55097 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.39□□□□□ -0.11
CtskP55097 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CtskP55097 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.39□□□□□ -0.11
CtskP55097 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.39□□□□□ -0.11
CtskP55097 Gm19891-201ENSMUST00000189771 303 ntBASIC14.39□□□□□ -0.11
CtskP55097 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.39□□□□□ -0.11
CtskP55097 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CtskP55097 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.39□□□□□ -0.11
CtskP55097 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.39□□□□□ -0.11
CtskP55097 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtskP55097 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.38□□□□□ -0.11
CtskP55097 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CtskP55097 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.38□□□□□ -0.11
CtskP55097 Gm15693-201ENSMUST00000120470 637 ntBASIC14.38□□□□□ -0.11
CtskP55097 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
CtskP55097 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.38□□□□□ -0.11
CtskP55097 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.38□□□□□ -0.11
CtskP55097 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.38□□□□□ -0.11
CtskP55097 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CtskP55097 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CtskP55097 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.38□□□□□ -0.11
CtskP55097 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CtskP55097 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtskP55097 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms