Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lbx1P52955 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lbx1P52955 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Lbx1P52955 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lbx1P52955 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lbx1P52955 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.11□□□□□ -0.15
Lbx1P52955 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Lbx1P52955 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.11□□□□□ -0.15
Lbx1P52955 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lbx1P52955 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lbx1P52955 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lbx1P52955 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.1□□□□□ -0.15
Lbx1P52955 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.1□□□□□ -0.15
Lbx1P52955 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lbx1P52955 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Lbx1P52955 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.1□□□□□ -0.15
Lbx1P52955 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.1□□□□□ -0.15
Lbx1P52955 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lbx1P52955 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lbx1P52955 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.09□□□□□ -0.15
Lbx1P52955 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Lbx1P52955 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lbx1P52955 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Gm12585-201ENSMUST00000117307 290 ntBASIC14.09□□□□□ -0.15
Lbx1P52955 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Gm2495-201ENSMUST00000191160 466 ntBASIC14.09□□□□□ -0.15
Lbx1P52955 Gm38002-201ENSMUST00000193255 180 ntBASIC14.09□□□□□ -0.15
Lbx1P52955 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.09□□□□□ -0.15
Lbx1P52955 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Lbx1P52955 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.09□□□□□ -0.15
Lbx1P52955 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lbx1P52955 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.09□□□□□ -0.15
Lbx1P52955 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Lbx1P52955 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lbx1P52955 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.08□□□□□ -0.15
Lbx1P52955 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lbx1P52955 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lbx1P52955 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Lbx1P52955 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lbx1P52955 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lbx1P52955 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Lbx1P52955 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.08□□□□□ -0.16
Lbx1P52955 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.08□□□□□ -0.16
Lbx1P52955 Gm5279-201ENSMUST00000199575 745 ntBASIC14.08□□□□□ -0.16
Lbx1P52955 Gm8463-201ENSMUST00000208573 613 ntBASIC14.08□□□□□ -0.16
Lbx1P52955 Gm45453-201ENSMUST00000211758 853 ntBASIC14.08□□□□□ -0.16
Lbx1P52955 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.08□□□□□ -0.16
Lbx1P52955 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.08□□□□□ -0.16
Lbx1P52955 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lbx1P52955 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lbx1P52955 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.08□□□□□ -0.16
Lbx1P52955 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms