Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.47■□□□□ 0.07
Shmt1P50431 Gm9824-201ENSMUST00000178707 561 ntBASIC15.47■□□□□ 0.07
Shmt1P50431 Gm18766-201ENSMUST00000189811 808 ntBASIC15.47■□□□□ 0.07
Shmt1P50431 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.47■□□□□ 0.07
Shmt1P50431 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Shmt1P50431 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Shmt1P50431 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shmt1P50431 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.47■□□□□ 0.07
Shmt1P50431 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Shmt1P50431 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Shmt1P50431 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.46■□□□□ 0.07
Shmt1P50431 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.46■□□□□ 0.07
Shmt1P50431 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.46■□□□□ 0.07
Shmt1P50431 Gm22175-201ENSMUST00000175007 78 ntBASIC15.46■□□□□ 0.07
Shmt1P50431 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.46■□□□□ 0.07
Shmt1P50431 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.46■□□□□ 0.07
Shmt1P50431 Gm18049-201ENSMUST00000208909 581 ntBASIC15.46■□□□□ 0.07
Shmt1P50431 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.46■□□□□ 0.07
Shmt1P50431 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Shmt1P50431 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Shmt1P50431 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Shmt1P50431 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.46■□□□□ 0.06
Shmt1P50431 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shmt1P50431 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.46■□□□□ 0.06
Shmt1P50431 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Shmt1P50431 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Shmt1P50431 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Shmt1P50431 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Shmt1P50431 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.45■□□□□ 0.06
Shmt1P50431 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.45■□□□□ 0.06
Shmt1P50431 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Shmt1P50431 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Shmt1P50431 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Shmt1P50431 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.45■□□□□ 0.06
Shmt1P50431 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Shmt1P50431 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Shmt1P50431 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Shmt1P50431 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Shmt1P50431 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Gm6415-201ENSMUST00000118488 348 ntBASIC15.44■□□□□ 0.06
Shmt1P50431 Gm13823-201ENSMUST00000119930 345 ntBASIC15.44■□□□□ 0.06
Shmt1P50431 Gm15693-201ENSMUST00000120470 637 ntBASIC15.44■□□□□ 0.06
Shmt1P50431 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Shmt1P50431 Gm38294-201ENSMUST00000192831 381 ntBASIC15.44■□□□□ 0.06
Shmt1P50431 Gm20949-201ENSMUST00000206478 952 ntBASIC15.44■□□□□ 0.06
Shmt1P50431 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Shmt1P50431 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Shmt1P50431 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Shmt1P50431 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms