Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atoh1P48985 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.42■□□□□ 0.22
Atoh1P48985 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.42■□□□□ 0.22
Atoh1P48985 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Gm13392-201ENSMUST00000117708 150 ntBASIC16.42■□□□□ 0.22
Atoh1P48985 Gm13226-201ENSMUST00000117838 404 ntBASIC16.42■□□□□ 0.22
Atoh1P48985 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.42■□□□□ 0.22
Atoh1P48985 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Atoh1P48985 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.42■□□□□ 0.22
Atoh1P48985 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Atoh1P48985 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Atoh1P48985 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Atoh1P48985 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Atoh1P48985 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Atoh1P48985 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atoh1P48985 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Atoh1P48985 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.41■□□□□ 0.22
Atoh1P48985 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Atoh1P48985 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atoh1P48985 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atoh1P48985 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Atoh1P48985 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atoh1P48985 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.41■□□□□ 0.22
Atoh1P48985 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.41■□□□□ 0.22
Atoh1P48985 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Atoh1P48985 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Atoh1P48985 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.41■□□□□ 0.22
Atoh1P48985 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.41■□□□□ 0.22
Atoh1P48985 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atoh1P48985 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.41■□□□□ 0.22
Atoh1P48985 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atoh1P48985 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atoh1P48985 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Atoh1P48985 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Atoh1P48985 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Atoh1P48985 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.4■□□□□ 0.22
Atoh1P48985 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atoh1P48985 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Atoh1P48985 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.4■□□□□ 0.22
Atoh1P48985 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Gm4804-201ENSMUST00000182234 999 ntBASIC16.4■□□□□ 0.22
Atoh1P48985 Gm27486-201ENSMUST00000184923 80 ntBASIC16.4■□□□□ 0.22
Atoh1P48985 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Atoh1P48985 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Atoh1P48985 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atoh1P48985 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Atoh1P48985 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atoh1P48985 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.39■□□□□ 0.22
Atoh1P48985 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Atoh1P48985 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Atoh1P48985 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Atoh1P48985 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atoh1P48985 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atoh1P48985 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atoh1P48985 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.39■□□□□ 0.21
Atoh1P48985 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Atoh1P48985 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms