Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm6888-201ENSMUST00000221983 706 ntBASIC13.85□□□□□ -0.19
Nkx2-6P43688 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.85□□□□□ -0.19
Nkx2-6P43688 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-6P43688 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-6P43688 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.84□□□□□ -0.19
Nkx2-6P43688 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-6P43688 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Gm5566-201ENSMUST00000116118 459 ntBASIC13.84□□□□□ -0.19
Nkx2-6P43688 Gm12151-201ENSMUST00000121374 290 ntBASIC13.84□□□□□ -0.19
Nkx2-6P43688 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Gm5479-201ENSMUST00000160578 435 ntBASIC13.84□□□□□ -0.19
Nkx2-6P43688 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Gm27533-201ENSMUST00000183800 152 ntBASIC13.84□□□□□ -0.19
Nkx2-6P43688 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.84□□□□□ -0.19
Nkx2-6P43688 Gm9063-201ENSMUST00000223299 582 ntBASIC13.84□□□□□ -0.19
Nkx2-6P43688 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-6P43688 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-6P43688 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-6P43688 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Nkx2-6P43688 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-6P43688 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.83□□□□□ -0.2
Nkx2-6P43688 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Gm13823-201ENSMUST00000119930 345 ntBASIC13.83□□□□□ -0.2
Nkx2-6P43688 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Gm5866-201ENSMUST00000177881 973 ntBASIC13.83□□□□□ -0.2
Nkx2-6P43688 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.83□□□□□ -0.2
Nkx2-6P43688 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.83□□□□□ -0.2
Nkx2-6P43688 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-6P43688 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-6P43688 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms