Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox18P43680 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox18P43680 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox18P43680 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 Gm4984-201ENSMUST00000115987 360 ntBASIC14.02□□□□□ -0.17
Sox18P43680 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox18P43680 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox18P43680 Gm25116-201ENSMUST00000157191 122 ntBASIC14.02□□□□□ -0.17
Sox18P43680 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox18P43680 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.02□□□□□ -0.17
Sox18P43680 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox18P43680 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sox18P43680 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Sox18P43680 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.01□□□□□ -0.17
Sox18P43680 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox18P43680 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC14.01□□□□□ -0.17
Sox18P43680 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sox18P43680 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Sox18P43680 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Sox18P43680 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.01□□□□□ -0.17
Sox18P43680 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.01□□□□□ -0.17
Sox18P43680 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox18P43680 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox18P43680 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14□□□□□ -0.17
Sox18P43680 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14□□□□□ -0.17
Sox18P43680 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14□□□□□ -0.17
Sox18P43680 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Sox18P43680 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14□□□□□ -0.17
Sox18P43680 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14□□□□□ -0.17
Sox18P43680 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14□□□□□ -0.17
Sox18P43680 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14□□□□□ -0.17
Sox18P43680 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14□□□□□ -0.17
Sox18P43680 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14□□□□□ -0.17
Sox18P43680 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox18P43680 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox18P43680 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms