Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm27300-201ENSMUST00000184085 97 ntBASIC16.43■□□□□ 0.22
Sdc2P43407 Gm27335-201ENSMUST00000184758 97 ntBASIC16.43■□□□□ 0.22
Sdc2P43407 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.43■□□□□ 0.22
Sdc2P43407 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.43■□□□□ 0.22
Sdc2P43407 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sdc2P43407 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sdc2P43407 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sdc2P43407 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdc2P43407 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Sdc2P43407 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sdc2P43407 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.42■□□□□ 0.22
Sdc2P43407 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Sdc2P43407 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sdc2P43407 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.42■□□□□ 0.22
Sdc2P43407 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.42■□□□□ 0.22
Sdc2P43407 Gm27628-201ENSMUST00000184911 107 ntBASIC16.42■□□□□ 0.22
Sdc2P43407 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.42■□□□□ 0.22
Sdc2P43407 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sdc2P43407 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sdc2P43407 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdc2P43407 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.41■□□□□ 0.22
Sdc2P43407 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.41■□□□□ 0.22
Sdc2P43407 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
Sdc2P43407 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Mir5131-201ENSMUST00000175426 93 ntBASIC16.41■□□□□ 0.22
Sdc2P43407 Gm9726-201ENSMUST00000180321 678 ntBASIC16.41■□□□□ 0.22
Sdc2P43407 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
Sdc2P43407 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.41■□□□□ 0.22
Sdc2P43407 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sdc2P43407 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sdc2P43407 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdc2P43407 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.4■□□□□ 0.22
Sdc2P43407 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Sdc2P43407 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.4■□□□□ 0.22
Sdc2P43407 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.4■□□□□ 0.22
Sdc2P43407 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Sdc2P43407 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sdc2P43407 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.39■□□□□ 0.22
Sdc2P43407 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sdc2P43407 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sdc2P43407 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Sdc2P43407 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Sdc2P43407 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sdc2P43407 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms