Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC19.05■□□□□ 0.64
Col18a1P39061 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col18a1P39061 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col18a1P39061 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.04■□□□□ 0.64
Col18a1P39061 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Col18a1P39061 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Col18a1P39061 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Gm4935-201ENSMUST00000221316 1198 ntBASIC19.04■□□□□ 0.64
Col18a1P39061 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.04■□□□□ 0.64
Col18a1P39061 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Col18a1P39061 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col18a1P39061 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Col18a1P39061 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.04■□□□□ 0.64
Col18a1P39061 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col18a1P39061 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC19.04■□□□□ 0.64
Col18a1P39061 Gm25927-201ENSMUST00000175058 117 ntBASIC19.04■□□□□ 0.64
Col18a1P39061 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC19.04■□□□□ 0.64
Col18a1P39061 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC19.04■□□□□ 0.64
Col18a1P39061 Gm7118-201ENSMUST00000200167 1003 ntBASIC19.04■□□□□ 0.64
Col18a1P39061 Gm5363-201ENSMUST00000211927 938 ntBASIC19.04■□□□□ 0.64
Col18a1P39061 AC073947.2-201ENSMUST00000215888 1130 ntBASIC19.04■□□□□ 0.64
Col18a1P39061 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Col18a1P39061 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Col18a1P39061 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Col18a1P39061 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC19.03■□□□□ 0.64
Col18a1P39061 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC19.03■□□□□ 0.64
Col18a1P39061 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC19.03■□□□□ 0.64
Col18a1P39061 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC19.03■□□□□ 0.64
Col18a1P39061 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col18a1P39061 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.02■□□□□ 0.64
Col18a1P39061 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col18a1P39061 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col18a1P39061 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col18a1P39061 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col18a1P39061 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
Col18a1P39061 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.02■□□□□ 0.64
Col18a1P39061 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col18a1P39061 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC19.02■□□□□ 0.64
Col18a1P39061 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC19.02■□□□□ 0.64
Col18a1P39061 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC19.02■□□□□ 0.64
Col18a1P39061 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col18a1P39061 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.02■□□□□ 0.64
Col18a1P39061 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.02■□□□□ 0.64
Col18a1P39061 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC19.02■□□□□ 0.64
Col18a1P39061 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Col18a1P39061 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col18a1P39061 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col18a1P39061 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col18a1P39061 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Col18a1P39061 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col18a1P39061 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col18a1P39061 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC19.01■□□□□ 0.63
Col18a1P39061 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col18a1P39061 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col18a1P39061 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC19.01■□□□□ 0.63
Col18a1P39061 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col18a1P39061 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col18a1P39061 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col18a1P39061 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col18a1P39061 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col18a1P39061 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col18a1P39061 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col18a1P39061 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col18a1P39061 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col18a1P39061 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col18a1P39061 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col18a1P39061 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col18a1P39061 Gm24255-201ENSMUST00000104481 128 ntBASIC19.01■□□□□ 0.63
Col18a1P39061 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC19.01■□□□□ 0.63
Col18a1P39061 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms