Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.58□□□□□ -0.08
LdlrP35951 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LdlrP35951 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LdlrP35951 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.57□□□□□ -0.08
LdlrP35951 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LdlrP35951 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.57□□□□□ -0.08
LdlrP35951 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.57□□□□□ -0.08
LdlrP35951 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LdlrP35951 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LdlrP35951 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.57□□□□□ -0.08
LdlrP35951 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
LdlrP35951 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.57□□□□□ -0.08
LdlrP35951 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LdlrP35951 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LdlrP35951 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LdlrP35951 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LdlrP35951 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LdlrP35951 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
LdlrP35951 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LdlrP35951 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LdlrP35951 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.56□□□□□ -0.08
LdlrP35951 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.56□□□□□ -0.08
LdlrP35951 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.56□□□□□ -0.08
LdlrP35951 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LdlrP35951 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LdlrP35951 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
LdlrP35951 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.56□□□□□ -0.08
LdlrP35951 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LdlrP35951 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LdlrP35951 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Gm15920-201ENSMUST00000118998 402 ntBASIC14.55□□□□□ -0.08
LdlrP35951 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.55□□□□□ -0.08
LdlrP35951 Mir8117-201ENSMUST00000184773 107 ntBASIC14.55□□□□□ -0.08
LdlrP35951 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.55□□□□□ -0.08
LdlrP35951 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.55□□□□□ -0.08
LdlrP35951 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LdlrP35951 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LdlrP35951 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.55□□□□□ -0.08
LdlrP35951 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.55□□□□□ -0.08
LdlrP35951 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LdlrP35951 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms