Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Thbs1P35441 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Thbs1P35441 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Thbs1P35441 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Thbs1P35441 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Thbs1P35441 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Thbs1P35441 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.54□□□□□ -0.24
Thbs1P35441 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.54□□□□□ -0.24
Thbs1P35441 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.54□□□□□ -0.24
Thbs1P35441 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Thbs1P35441 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.54□□□□□ -0.24
Thbs1P35441 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Thbs1P35441 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Thbs1P35441 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Thbs1P35441 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.53□□□□□ -0.24
Thbs1P35441 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.53□□□□□ -0.24
Thbs1P35441 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Thbs1P35441 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.53□□□□□ -0.24
Thbs1P35441 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.53□□□□□ -0.24
Thbs1P35441 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.53□□□□□ -0.24
Thbs1P35441 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Thbs1P35441 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.53□□□□□ -0.24
Thbs1P35441 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.53□□□□□ -0.24
Thbs1P35441 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Thbs1P35441 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.53□□□□□ -0.24
Thbs1P35441 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thbs1P35441 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.53□□□□□ -0.24
Thbs1P35441 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.53□□□□□ -0.24
Thbs1P35441 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thbs1P35441 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.52□□□□□ -0.25
Thbs1P35441 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Thbs1P35441 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.52□□□□□ -0.25
Thbs1P35441 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.52□□□□□ -0.25
Thbs1P35441 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.52□□□□□ -0.25
Thbs1P35441 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Thbs1P35441 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.52□□□□□ -0.25
Thbs1P35441 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Thbs1P35441 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thbs1P35441 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Thbs1P35441 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thbs1P35441 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms