Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.54□□□□□ -0.24
Nedd8P29595 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nedd8P29595 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nedd8P29595 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nedd8P29595 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nedd8P29595 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nedd8P29595 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Nedd8P29595 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Nedd8P29595 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.53□□□□□ -0.24
Nedd8P29595 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nedd8P29595 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.53□□□□□ -0.24
Nedd8P29595 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.53□□□□□ -0.24
Nedd8P29595 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nedd8P29595 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nedd8P29595 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nedd8P29595 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Nedd8P29595 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nedd8P29595 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Nedd8P29595 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.52□□□□□ -0.24
Nedd8P29595 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nedd8P29595 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nedd8P29595 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.52□□□□□ -0.25
Nedd8P29595 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Nedd8P29595 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.52□□□□□ -0.25
Nedd8P29595 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.52□□□□□ -0.25
Nedd8P29595 Gm19164-201ENSMUST00000210667 640 ntBASIC13.52□□□□□ -0.25
Nedd8P29595 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.52□□□□□ -0.25
Nedd8P29595 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.52□□□□□ -0.25
Nedd8P29595 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.52□□□□□ -0.25
Nedd8P29595 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.52□□□□□ -0.25
Nedd8P29595 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.52□□□□□ -0.25
Nedd8P29595 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Nedd8P29595 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nedd8P29595 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nedd8P29595 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms