Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Gm20553-201ENSMUST00000204205 844 ntBASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfrsf9P20334 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Gm23547-201ENSMUST00000158210 271 ntBASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Gm18489-201ENSMUST00000172565 551 ntBASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Gm7774-201ENSMUST00000200064 533 ntBASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf9P20334 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf9P20334 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms