Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fv4P11370 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fv4P11370 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fv4P11370 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fv4P11370 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fv4P11370 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fv4P11370 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.16□□□□□ -0.14
Fv4P11370 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.16□□□□□ -0.14
Fv4P11370 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Fv4P11370 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Olfr286-202ENSMUST00000205305 969 ntBASIC14.16□□□□□ -0.14
Fv4P11370 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.16□□□□□ -0.14
Fv4P11370 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Fv4P11370 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.16□□□□□ -0.14
Fv4P11370 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.16□□□□□ -0.14
Fv4P11370 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.16□□□□□ -0.14
Fv4P11370 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fv4P11370 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Fv4P11370 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Fv4P11370 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.15□□□□□ -0.14
Fv4P11370 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Fv4P11370 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Fv4P11370 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.15□□□□□ -0.14
Fv4P11370 Gm12350-201ENSMUST00000121208 462 ntBASIC14.15□□□□□ -0.14
Fv4P11370 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.15□□□□□ -0.14
Fv4P11370 Gm16026-204ENSMUST00000162652 683 ntBASIC14.15□□□□□ -0.14
Fv4P11370 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.15□□□□□ -0.14
Fv4P11370 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.15□□□□□ -0.14
Fv4P11370 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.15□□□□□ -0.14
Fv4P11370 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.15□□□□□ -0.14
Fv4P11370 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Fv4P11370 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Fv4P11370 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Fv4P11370 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fv4P11370 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.14□□□□□ -0.15
Fv4P11370 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.14□□□□□ -0.15
Fv4P11370 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Fv4P11370 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.14□□□□□ -0.15
Fv4P11370 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.14□□□□□ -0.15
Fv4P11370 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Fv4P11370 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Fv4P11370 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.14□□□□□ -0.15
Fv4P11370 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.14□□□□□ -0.15
Fv4P11370 Gm10154-201ENSMUST00000084445 354 ntBASIC14.14□□□□□ -0.15
Fv4P11370 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Fv4P11370 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fv4P11370 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms