Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.17■□□□□ 0.18
Hoxc6P10629 Gm9726-201ENSMUST00000180321 678 ntBASIC16.17■□□□□ 0.18
Hoxc6P10629 Gm6266-201ENSMUST00000203844 806 ntBASIC16.17■□□□□ 0.18
Hoxc6P10629 Gm6916-202ENSMUST00000205523 195 ntBASIC16.17■□□□□ 0.18
Hoxc6P10629 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.17■□□□□ 0.18
Hoxc6P10629 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.17■□□□□ 0.18
Hoxc6P10629 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Hoxc6P10629 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc6P10629 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Gm9002-201ENSMUST00000178437 499 ntBASIC16.16■□□□□ 0.18
Hoxc6P10629 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.16■□□□□ 0.18
Hoxc6P10629 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.16■□□□□ 0.18
Hoxc6P10629 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc6P10629 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hoxc6P10629 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.15■□□□□ 0.18
Hoxc6P10629 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc6P10629 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.15■□□□□ 0.18
Hoxc6P10629 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc6P10629 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Gm15824-201ENSMUST00000119516 955 ntBASIC16.14■□□□□ 0.17
Hoxc6P10629 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.14■□□□□ 0.17
Hoxc6P10629 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.14■□□□□ 0.17
Hoxc6P10629 Gm33320-201ENSMUST00000192232 530 ntBASIC16.14■□□□□ 0.17
Hoxc6P10629 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.14■□□□□ 0.17
Hoxc6P10629 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Hoxc6P10629 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc6P10629 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc6P10629 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc6P10629 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms