Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.07□□□□□ -0.8
Smim1P0C8K7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smim1P0C8K7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.06□□□□□ -0.8
Smim1P0C8K7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.06□□□□□ -0.8
Smim1P0C8K7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Gm7370-201ENSMUST00000219471 767 ntBASIC10.06□□□□□ -0.8
Smim1P0C8K7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.06□□□□□ -0.8
Smim1P0C8K7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smim1P0C8K7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.05□□□□□ -0.8
Smim1P0C8K7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms